Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03929 | Not Available | Positive | 4180290 - 4180982 | 26152.5 |
| hth-type transcriptional regulator mcbr | PH7735_03930 | Not Available | Positive | 4181013 - 4181663 | 24119.5 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | PH7735_03931 | Q16BI0 | Negative | 4181775 - 4182737 | 34998.9 |
| dna gyrase inhibitor | PH7735_03932 | Not Available | Positive | 4182897 - 4183733 | 31073.2 |
| hypothetical protein | PH7735_03933 | Not Available | Positive | 4183741 - 4184376 | 23699.2 |
| cysteine/o-acetylserine efflux protein | PH7735_03934 | Not Available | Negative | 4184355 - 4184948 | 21150.6 |
| leucine-responsive regulatory protein | PH7735_03935 | P0ACJ2 | Positive | 4184959 - 4185474 | 18925.0 |
| hypothetical protein | PH7735_03936 | Not Available | Negative | 4185491 - 4186156 | 23017.0 |
| malyl-coa lyase | PH7735_03937 | A3PGR7 | Negative | 4186192 - 4187154 | 34241.6 |
| hypothetical protein | PH7735_03938 | Not Available | Positive | 4187669 - 4188670 | 35669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
