Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00349 | Not Available | Positive | 379465 - 379788 | 12175.7 |
| putative zinc finger/helix-turn-helix protein, ygit family | PH7735_00350 | Not Available | Negative | 379879 - 380328 | 16575.9 |
| hypothetical protein | PH7735_00351 | Not Available | Negative | 380347 - 380670 | 11805.5 |
| hypothetical protein | PH7735_00352 | Not Available | Positive | 380977 - 382101 | 40628.4 |
| dna repair and recombination protein radb | PH7735_00353 | Not Available | Positive | 382323 - 383591 | 45910.3 |
| hypothetical protein | PH7735_00354 | Not Available | Positive | 383765 - 383926 | 5775.79 |
| hypothetical protein | PH7735_00355 | Not Available | Positive | 384122 - 384814 | 25904.8 |
| hypothetical protein | PH7735_00356 | Not Available | Positive | 384817 - 385038 | 7891.32 |
| hypothetical protein | PH7735_00357 | Not Available | Positive | 385180 - 385614 | 16258.7 |
| hypothetical protein | PH7735_00358 | P00472 | Positive | 385872 - 386897 | 39702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
