Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03849 | Not Available | Negative | 4088573 - 4089016 | 15902.1 |
| glutamate synthase | PH7735_03850 | O34849 | Positive | 4089131 - 4090636 | 55091.9 |
| sulfoxide reductase catalytic subunit yedy precursor | PH7735_03851 | Q5LNE0 | Positive | 4090706 - 4091614 | 33961.5 |
| hypothetical protein | PH7735_03852 | Not Available | Negative | 4091628 - 4092287 | 24371.8 |
| flavocytochrome yedz | PH7735_03853 | A6WYN0 | Positive | 4092425 - 4093018 | 22067.2 |
| hypothetical protein | PH7735_03854 | Not Available | Negative | 4093359 - 4093736 | 13885.2 |
| urease operon transcriptional activator | PH7735_03855 | Not Available | Negative | 4093733 - 4094740 | 36455.7 |
| dihydroorotase | PH7735_03856 | Not Available | Positive | 4094981 - 4096393 | 50642.2 |
| n-ethylammeline chlorohydrolase | PH7735_03857 | Not Available | Positive | 4096463 - 4096834 | 13238.8 |
| amidohydrolase family protein | PH7735_03858 | Not Available | Positive | 4096804 - 4097853 | 37974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
