Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase fadd15 | PH7735_03829 | Not Available | Positive | 4068067 - 4070130 | 77051.2 |
| sulfate/thiosulfate import atp-binding protein cysa | PH7735_03830 | Not Available | Positive | 4070127 - 4070942 | 30232.6 |
| liv-i protein h | PH7735_03831 | P0AEX8 | Positive | 4070984 - 4071988 | 36170.4 |
| hypothetical protein | PH7735_03832 | Not Available | Positive | 4071993 - 4072247 | 8824.64 |
| leucine/isoleucine/valine transporter permease subunit | PH7735_03833 | Not Available | Positive | 4072253 - 4073329 | 39202.9 |
| hypothetical protein | PH7735_03834 | Not Available | Positive | 4073417 - 4074703 | 46378.0 |
| liv-i protein f | PH7735_03835 | Not Available | Positive | 4074775 - 4075599 | 30522.7 |
| phenylacetate-coenzyme a ligase | PH7735_03836 | P76085 | Positive | 4075767 - 4076987 | 42884.1 |
| cysteine synthase | PH7735_03837 | D2Z027 | Positive | 4077191 - 4078264 | 38602.6 |
| putative acetyltransferase | PH7735_03838 | Not Available | Positive | 4078367 - 4078906 | 19489.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
