Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional p-450/nadph-p450 reductase 2 | PH7735_00339 | Q9ZW95 | Negative | 371436 - 372788 | 49604.0 |
| hypothetical protein | PH7735_00340 | Not Available | Positive | 372915 - 373526 | 22081.4 |
| elongation factor tu | PH7735_00341 | Not Available | Positive | 373631 - 374806 | 42825.0 |
| hypothetical protein | PH7735_00342 | Not Available | Positive | 374997 - 375908 | 34340.5 |
| hypothetical protein | PH7735_00343 | Not Available | Negative | 375914 - 376597 | 25633.8 |
| Trna-trp | Not Available | Not Available | Positive | 376726 - 376801 | Not Available |
| site-specific tyrosine recombinase xerc | PH7735_00345 | Not Available | Negative | 376959 - 378320 | 49095.2 |
| hypothetical protein | PH7735_00346 | Not Available | Negative | 378320 - 378832 | 19603.0 |
| dna binding domain, excisionase family | PH7735_00347 | Not Available | Positive | 379048 - 379242 | 6992.49 |
| hypothetical protein | PH7735_00348 | Not Available | Positive | 379217 - 379435 | 8032.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
