Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03699 | Not Available | Positive | 3930906 - 3933170 | 82715.9 |
| transglycosylase slt domain protein | PH7735_03700 | Not Available | Positive | 3933233 - 3933994 | 28136.2 |
| flagellar biosynthesis protein flha | PH7735_03701 | Q8YDK9 | Positive | 3933991 - 3936060 | 74030.0 |
| flagellar biosynthesis protein flir | PH7735_03702 | Not Available | Positive | 3936057 - 3936824 | 27220.5 |
| flagellar biosynthetic protein flhb | PH7735_03703 | Q56886 | Positive | 3936821 - 3937897 | 39701.6 |
| hypothetical protein | PH7735_03704 | Not Available | Positive | 3937894 - 3938313 | 15957.4 |
| hypothetical protein | PH7735_03705 | Not Available | Negative | 3938310 - 3938822 | 18566.5 |
| basal body l-ring protein | PH7735_03706 | Q5LWX7 | Negative | 3938834 - 3939442 | 22260.4 |
| flagellar basal body p-ring biosynthesis protein flga | PH7735_03707 | Not Available | Negative | 3939571 - 3939987 | 14597.8 |
| distal rod protein | PH7735_03708 | Q06172 | Negative | 3939987 - 3940772 | 27422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
