Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgl | PH7735_03689 | Not Available | Positive | 3922829 - 3923833 | 35663.8 |
| basal body p-ring protein | PH7735_03690 | Q5LWZ2 | Positive | 3923830 - 3924945 | 39008.2 |
| flagellar biosynthetic protein flip precursor | PH7735_03691 | Q45980 | Negative | 3925105 - 3925845 | 26676.7 |
| flagellar motor switch protein | PH7735_03692 | Not Available | Negative | 3925842 - 3926111 | 9678.57 |
| hypothetical protein | PH7735_03693 | Not Available | Negative | 3926108 - 3926713 | 21984.8 |
| flagellar m-ring protein | PH7735_03694 | Q04954 | Negative | 3926710 - 3928329 | 58168.4 |
| flagellar basal body-associated protein flil | PH7735_03695 | Not Available | Positive | 3928444 - 3928932 | 17813.9 |
| hypothetical protein | PH7735_03696 | Not Available | Positive | 3928943 - 3929314 | 12952.5 |
| hypothetical protein | PH7735_03697 | Not Available | Positive | 3929311 - 3929910 | 21744.1 |
| chemotaxis protein mota | PH7735_03698 | P97215 | Positive | 3930040 - 3930909 | 31374.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
