Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimodular nonribosomal peptide synthase | PH7735_03669 | P45745 | Positive | 3891578 - 3896227 | 168359.0 |
| phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex | PH7735_03670 | A1YCA5 | Positive | 3896227 - 3896988 | 27761.3 |
| polysaccharide chain length determinant protein, pep-cterm locus subfamily | PH7735_03671 | Not Available | Positive | 3896985 - 3898262 | 47095.8 |
| undecaprenyl phosphate n,n'-diacetylbacillosamine 1-phosphate transferase | PH7735_03672 | P14186 | Positive | 3898770 - 3899438 | 25421.8 |
| hypothetical protein | PH7735_03673 | Not Available | Positive | 3899518 - 3900966 | 53607.9 |
| o-acetyltransferase oata | PH7735_03674 | Q8Y7I6 | Positive | 3901065 - 3903062 | 73371.9 |
| 6'''-hydroxyparomomycin c oxidase | PH7735_03675 | M1VMF7 | Positive | 3903059 - 3904651 | 58031.4 |
| diacetyl reductase | PH7735_03676 | P55434 | Positive | 3904644 - 3905414 | 27240.1 |
| putative n-acetylmannosaminyltransferase | PH7735_03677 | A8G842 | Negative | 3905429 - 3906187 | 27146.2 |
| oxidoreductase family, nad-binding rossmann fold | PH7735_03678 | Not Available | Positive | 3906317 - 3907435 | 40754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
