Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | PH7735_03649 | Not Available | Positive | 3856191 - 3857441 | 44336.3 |
| hypothetical protein | PH7735_03650 | Not Available | Negative | 3857438 - 3858136 | 24731.9 |
| elongation factor 4 | PH7735_03651 | Q5LUS0 | Positive | 3858346 - 3860145 | 66910.6 |
| hypothetical protein | PH7735_03652 | Not Available | Positive | 3860744 - 3861694 | 35304.3 |
| entericidin b membrane lipoprotein | PH7735_03653 | Not Available | Negative | 3862050 - 3862187 | 4641.63 |
| hypothetical protein | PH7735_03654 | Not Available | Positive | 3862449 - 3863009 | 20374.2 |
| molybdopterin biosynthesis protein moeb | PH7735_03655 | Not Available | Positive | 3863086 - 3863478 | 13834.6 |
| hypothetical protein | PH7735_03656 | Not Available | Negative | 3863521 - 3863904 | 14826.2 |
| putative abc transporter atp-binding protein | PH7735_03657 | Not Available | Positive | 3864154 - 3867156 | 111901.0 |
| d-lactate dehydrogenase | PH7735_03658 | P06149 | Negative | 3867594 - 3869276 | 62401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
