Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose 1-dehydrogenase 4 | PH7735_03509 | P10528 | Positive | 3713034 - 3713780 | 25643.9 |
| nadp-dependent fatty aldehyde dehydrogenase | PH7735_03510 | Q08IC0 | Positive | 3713855 - 3715351 | 52456.3 |
| ahpc/tsa family protein | PH7735_03511 | Not Available | Positive | 3715444 - 3715959 | 19006.6 |
| acetaldehyde dehydrogenase 2 | PH7735_03512 | P46368 | Positive | 3716432 - 3717976 | 56063.0 |
| hypothetical protein | PH7735_03513 | Not Available | Positive | 3718043 - 3718384 | 12313.7 |
| sensor protein divl | PH7735_03514 | Q9RQQ9 | Negative | 3718381 - 3720582 | 81337.8 |
| hypothetical protein | PH7735_03515 | Not Available | Negative | 3720586 - 3721755 | 42411.4 |
| transcriptional regulatory protein devr (dosr) | PH7735_03516 | A8R3T0 | Negative | 3721788 - 3722486 | 25133.4 |
| quinoprotein ethanol dehydrogenase precursor | PH7735_03517 | A8R3S4 | Negative | 3722617 - 3724383 | 63987.0 |
| hypothetical protein | PH7735_03518 | Not Available | Positive | 3724562 - 3725107 | 20706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
