Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | PH7735_03459 | Not Available | Positive | 3656012 - 3656944 | 33504.7 |
| polymyxin resistance protein pmri | PH7735_03460 | Not Available | Positive | 3656957 - 3657730 | 28936.9 |
| hypothetical protein | PH7735_03461 | Not Available | Positive | 3657736 - 3657933 | 7169.61 |
| transposase is66 family protein | PH7735_03462 | Not Available | Positive | 3658097 - 3658633 | 21308.7 |
| cyclolysin | PH7735_03463 | Not Available | Positive | 3659915 - 3665248 | 182190.0 |
| dipeptide-binding protein | PH7735_03464 | Not Available | Positive | 3666093 - 3667673 | 57719.1 |
| glutathione transport system permease protein gsic | PH7735_03465 | P94311 | Positive | 3667810 - 3668781 | 35909.3 |
| glutathione transport system permease protein gsid | PH7735_03466 | P42063 | Positive | 3668778 - 3669740 | 34830.2 |
| glutathione import atp-binding protein gsia | PH7735_03467 | Q1RE96 | Positive | 3669737 - 3671428 | 62238.2 |
| hth-type transcriptional regulator puur | PH7735_03468 | Not Available | Positive | 3671506 - 3672105 | 21931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
