Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3632959 - 3633045 | Not Available |
| hemolysin, chromosomal | PH7735_03440 | Not Available | Negative | 3633400 - 3635670 | 76796.6 |
| long-chain-fatty-acid--amp ligase fadd26 | PH7735_03441 | A0A0H3C605 | Negative | 3635847 - 3637517 | 60110.9 |
| hypothetical protein | PH7735_03442 | Not Available | Positive | 3637717 - 3637950 | 8688.36 |
| dsba-like thioredoxin domain protein | PH7735_03443 | Not Available | Negative | 3637999 - 3638652 | 24090.2 |
| putative transporter yfdv | PH7735_03444 | Not Available | Negative | 3638726 - 3639655 | 32938.9 |
| putative hydrolase | PH7735_03445 | Not Available | Negative | 3639661 - 3640461 | 29496.1 |
| putative deoxyribonuclease ycfh | PH7735_03446 | P0AFQ9 | Negative | 3640458 - 3641264 | 29190.5 |
| dna polymerase iii subunit tau | PH7735_03447 | P52024 | Negative | 3641268 - 3642389 | 40147.4 |
| thymidylate kinase | PH7735_03448 | Q5LPV9 | Negative | 3642386 - 3643006 | 22838.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
