Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03429 | Not Available | Negative | 3624839 - 3625054 | 8066.71 |
| cell division inhibitor mind | PH7735_03430 | P72190 | Positive | 3625305 - 3626381 | 37381.8 |
| ethd protein | PH7735_03431 | Not Available | Negative | 3626457 - 3626765 | 10811.9 |
| hypothetical protein | PH7735_03432 | Not Available | Negative | 3626820 - 3627212 | 14607.8 |
| cytochrome c oxidase subunit 1-beta | PH7735_03433 | P98002 | Negative | 3627459 - 3629129 | 62240.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | PH7735_03434 | Not Available | Positive | 3629434 - 3630276 | 29637.1 |
| cytochrome c551 | PH7735_03435 | P00094 | Negative | 3630334 - 3630795 | 15707.6 |
| leucine-responsive regulatory protein | PH7735_03436 | Q9V0Y9 | Positive | 3631014 - 3631478 | 16863.5 |
| leucine export protein leue | PH7735_03437 | Not Available | Positive | 3631488 - 3632117 | 21829.2 |
| octanoyltransferase | PH7735_03438 | Q5LTM4 | Negative | 3632114 - 3632767 | 24248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
