Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t(6)a37 threonylcarbamoyladenosine biosynthesis protein | PH7735_03419 | Q5LLR7 | Negative | 3613282 - 3614385 | 38013.1 |
| uroporphyrinogen-iii synthase | PH7735_03420 | Not Available | Positive | 3614452 - 3615174 | 25168.3 |
| hypothetical protein | PH7735_03421 | Not Available | Positive | 3615226 - 3616599 | 48137.7 |
| putative protoheme ix biogenesis protein | PH7735_03422 | Not Available | Positive | 3616609 - 3618135 | 55517.5 |
| Trna-thr | Not Available | Not Available | Positive | 3618304 - 3618379 | Not Available |
| hypothetical protein | PH7735_03424 | Not Available | Positive | 3618826 - 3619326 | 17729.9 |
| hypothetical protein | PH7735_03425 | Not Available | Positive | 3619590 - 3619883 | 11364.9 |
| rhodanese-like domain protein | PH7735_03426 | Not Available | Positive | 3620087 - 3620548 | 16159.7 |
| l-lactate dehydrogenase | PH7735_03427 | B4SMK1 | Negative | 3620545 - 3621672 | 41481.9 |
| dna helicase ii | PH7735_03428 | Q4ULN5 | Positive | 3621782 - 3624262 | 91418.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
