Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphinothricin acetyltransferase ywnh | PH7735_03409 | Not Available | Negative | 3606165 - 3606662 | 18054.2 |
| hypothetical protein | PH7735_03410 | P42506 | Negative | 3606665 - 3607249 | 21740.2 |
| hypothetical protein | PH7735_03411 | Not Available | Positive | 3607532 - 3607846 | 10944.9 |
| adenosylhomocysteinase | PH7735_03412 | Q9ZNA5 | Positive | 3607919 - 3609310 | 50557.5 |
| hypothetical protein | PH7735_03413 | Not Available | Negative | 3609367 - 3610380 | 37826.6 |
| hypothetical protein | PH7735_03414 | Not Available | Positive | 3610621 - 3610962 | 12565.0 |
| hypothetical protein | PH7735_03415 | Not Available | Negative | 3611185 - 3611583 | 13656.1 |
| eve domain protein | PH7735_03416 | Q91YJ3 | Negative | 3611642 - 3612055 | 15612.5 |
| ycii-like protein | PH7735_03417 | Not Available | Negative | 3612055 - 3612324 | 9800.88 |
| glycerol-3-phosphate dehydrogenase | PH7735_03418 | Q1GCQ4 | Negative | 3612326 - 3613285 | 33241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
