Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export protein secb | PH7735_03389 | Q5LLN4 | Negative | 3584371 - 3584871 | 18978.7 |
| suppressor of f exclusion of phage t7 | PH7735_03390 | P37147 | Negative | 3584927 - 3585412 | 17584.7 |
| mitochondrial import inner membrane, translocase subunit | PH7735_03391 | Not Available | Positive | 3585517 - 3586173 | 24100.6 |
| membrane-bound lytic murein transglycosylase a precursor | PH7735_03392 | Not Available | Positive | 3586170 - 3587207 | 38390.2 |
| smr domain protein | PH7735_03393 | Not Available | Positive | 3587204 - 3587782 | 21482.4 |
| alpha/beta hydrolase family protein | PH7735_03394 | Not Available | Negative | 3587790 - 3588890 | 40368.3 |
| unfoldase hslu | PH7735_03395 | Q16CY2 | Negative | 3588961 - 3590271 | 48202.6 |
| general stress protein 69 | PH7735_03396 | P77735 | Negative | 3590268 - 3591302 | 37487.6 |
| atp-dependent protease subunit hslv | PH7735_03397 | Q16CY0 | Negative | 3591302 - 3591856 | 19136.0 |
| hypothetical protein | PH7735_03398 | Not Available | Positive | 3591919 - 3592860 | 36386.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
