Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03359 | Not Available | Positive | 3551055 - 3552593 | 56148.7 |
| hypothetical protein | PH7735_03360 | Not Available | Positive | 3552577 - 3553749 | 42098.8 |
| chromosome segregation protein | PH7735_03361 | Not Available | Negative | 3553850 - 3556459 | 94499.5 |
| putative metallophosphoesterase yhao | PH7735_03362 | Not Available | Negative | 3556463 - 3557590 | 40954.3 |
| dna polymerase iii subunit epsilon | PH7735_03363 | Not Available | Positive | 3557834 - 3558772 | 33759.3 |
| hypothetical protein | PH7735_03364 | Not Available | Negative | 3558777 - 3559508 | 27579.9 |
| hypothetical protein | PH7735_03365 | Q8W0Z7 | Negative | 3559664 - 3560386 | 26805.9 |
| branched-chain-amino-acid aminotransferase | PH7735_03366 | Not Available | Negative | 3560383 - 3561294 | 33320.9 |
| peptide methionine sulfoxide reductase msra 2 | PH7735_03367 | Q9A9E9 | Positive | 3561444 - 3562100 | 23837.3 |
| ribokinase | PH7735_03368 | Not Available | Negative | 3562113 - 3562985 | 30257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
