Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03329 | Q92HF4 | Negative | 3521950 - 3523566 | 60064.0 |
| ribosome maturation factor rimp | PH7735_03330 | Q1GCH5 | Negative | 3523570 - 3524151 | 21382.5 |
| dipeptide-binding protein | PH7735_03331 | P23847 | Negative | 3524335 - 3525879 | 56330.9 |
| glutathione import atp-binding protein gsia | PH7735_03332 | Not Available | Negative | 3525952 - 3527598 | 60287.6 |
| dipeptide transport system permease protein dppc | PH7735_03333 | P51000 | Negative | 3527611 - 3528810 | 42700.1 |
| glutathione transport system permease protein gsic | PH7735_03334 | Q8FJK9 | Negative | 3528807 - 3529805 | 35597.5 |
| proline iminopeptidase | PH7735_03335 | O32449 | Negative | 3529974 - 3530945 | 36396.3 |
| 3-demethylubiquinone-9 3-methyltransferase | PH7735_03336 | Q5LWM6 | Positive | 3530995 - 3531741 | 27263.6 |
| homoprotocatechuate degradation operon regulator, hpar | PH7735_03337 | Not Available | Negative | 3531754 - 3532191 | 15739.2 |
| (r)-stereoselective amidase | PH7735_03338 | P0DP68 | Negative | 3532192 - 3533022 | 29990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
