Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_03279 | Not Available | Positive | 3465179 - 3465388 | 7767.1 |
| hypothetical protein | PH7735_03280 | Not Available | Negative | 3465443 - 3466441 | 37099.8 |
| hypothetical protein | PH7735_03281 | Not Available | Negative | 3467751 - 3468740 | 38265.0 |
| hypothetical protein | PH7735_03282 | Not Available | Negative | 3468826 - 3469701 | 32594.1 |
| stf0 sulphotransferase | PH7735_03283 | Not Available | Negative | 3469715 - 3470434 | 26859.7 |
| putative glycosyl transferase | PH7735_03284 | P37783 | Positive | 3470623 - 3471843 | 45842.4 |
| putative undecaprenyl-phosphate n-acetylgalactosaminyl 1-phosphate transferase | PH7735_03285 | Q9ABR0 | Positive | 3471869 - 3472474 | 23008.4 |
| alginate biosynthesis protein alga | PH7735_03286 | B0RVK6 | Positive | 3472567 - 3474024 | 52587.7 |
| serralysin precursor | PH7735_03287 | Not Available | Positive | 3474147 - 3475640 | 52843.3 |
| hemolysin, chromosomal | PH7735_03288 | Not Available | Negative | 3475651 - 3477129 | 51118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
