Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | PH7735_03229 | Q5LLZ3 | Positive | 3387233 - 3388063 | 29438.6 |
| hopanoid-associated sugar epimerase | PH7735_03230 | Q9SK66 | Negative | 3388082 - 3389062 | 35158.6 |
| Trna-leu | Not Available | Not Available | Positive | 3389283 - 3389369 | Not Available |
| cyclolysin | PH7735_03232 | Not Available | Negative | 3389734 - 3394563 | 173525.0 |
| hemolysin, chromosomal | PH7735_03233 | Not Available | Negative | 3395136 - 3399863 | 166060.0 |
| hypothetical protein | PH7735_03234 | Not Available | Negative | 3400076 - 3400408 | 12036.7 |
| periplasmic glucans biosynthesis protein | PH7735_03235 | Not Available | Negative | 3400405 - 3400686 | 10195.2 |
| hypothetical protein | PH7735_03236 | Not Available | Negative | 3400676 - 3401221 | 19448.9 |
| hypothetical protein | PH7735_03237 | Not Available | Negative | 3401277 - 3401591 | 11808.0 |
| hypothetical protein | PH7735_03238 | P52124 | Negative | 3401655 - 3403175 | 54025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
