Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | PH7735_00279 | Not Available | Negative | 292808 - 293116 | 11503.0 |
| hypothetical protein | PH7735_00280 | Not Available | Negative | 293419 - 294039 | 23427.8 |
| adp-ribosyl-[dinitrogen reductase] glycohydrolase | PH7735_00281 | Q54U72 | Positive | 294152 - 295930 | 63189.8 |
| hypothetical protein | PH7735_00282 | Not Available | Positive | 295990 - 296250 | 9604.51 |
| hypothetical protein | PH7735_00283 | Not Available | Positive | 296774 - 298180 | 53631.5 |
| hypothetical protein | PH7735_00284 | Not Available | Positive | 298177 - 299019 | 32413.7 |
| chromosome segregation protein smc | PH7735_00285 | B9IS85 | Positive | 299012 - 302614 | 135661.0 |
| hypothetical protein | PH7735_00286 | Not Available | Positive | 302611 - 303786 | 43726.6 |
| hypothetical protein | PH7735_00287 | Not Available | Positive | 303966 - 304946 | 36941.0 |
| hypothetical protein | PH7735_00288 | Not Available | Positive | 305091 - 305318 | 8031.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
