Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine/imine deaminase | PH7735_03109 | Not Available | Positive | 3253736 - 3254155 | 15515.5 |
| hypothetical protein | PH7735_03110 | Not Available | Positive | 3254152 - 3254826 | 23272.5 |
| cyn operon transcriptional activator | PH7735_03111 | Not Available | Positive | 3254858 - 3255760 | 32697.4 |
| Trna-arg | Not Available | Not Available | Positive | 3255876 - 3255952 | Not Available |
| gluconate utilization system gnt-i transcriptional repressor | PH7735_03113 | Q9I1F6 | Positive | 3256086 - 3257105 | 37195.2 |
| hypothetical protein | PH7735_03114 | Not Available | Negative | 3257118 - 3258041 | 35611.3 |
| mannosyltransferase och1 | PH7735_03115 | Not Available | Negative | 3258052 - 3259050 | 38120.6 |
| hypothetical protein | PH7735_03116 | Not Available | Negative | 3259159 - 3261402 | 84342.1 |
| hypothetical protein | PH7735_03117 | Not Available | Negative | 3261441 - 3262493 | 39389.9 |
| creatinine amidohydrolase | PH7735_03118 | A0PM51 | Positive | 3262764 - 3263561 | 28350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
