Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductasec/mt0587 | PH7735_03069 | P96800 | Negative | 3211718 - 3212869 | 41591.7 |
| putative acyl-coa thioester hydrolase | PH7735_03070 | P0A1A2 | Positive | 3212960 - 3213349 | 14051.9 |
| hypothetical protein | PH7735_03071 | Not Available | Negative | 3213425 - 3213661 | 8812.95 |
| hypothetical protein | PH7735_03072 | Not Available | Negative | 3213955 - 3214350 | 13873.2 |
| putative abc transporter atp-binding protein yjjk | PH7735_03073 | P9WQK2 | Negative | 3214534 - 3216201 | 62107.8 |
| hypothetical protein | PH7735_03074 | Not Available | Positive | 3216399 - 3217355 | 36106.3 |
| ribosomal-protein-alanine acetyltransferase | PH7735_03075 | Not Available | Negative | 3217383 - 3218258 | 31981.3 |
| putative nicotinate-nucleotide adenylyltransferase | PH7735_03076 | Q5LW93 | Positive | 3218414 - 3219013 | 22536.2 |
| carboxylate/amino acid/amine transporter | PH7735_03077 | Not Available | Negative | 3219006 - 3219830 | 29329.0 |
| d-alanyl-d-alanine carboxypeptidase dacb precursor | PH7735_03078 | P24228 | Positive | 3219939 - 3221429 | 53457.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
