Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil dna glycosylase superfamily protein | PH7735_03029 | O86222 | Positive | 3167692 - 3168273 | 21854.4 |
| hypothetical protein | PH7735_03030 | Not Available | Positive | 3168270 - 3169064 | 27801.9 |
| glyoxylate/hydroxypyruvate reductase a | PH7735_03031 | A8GD46 | Negative | 3169204 - 3170133 | 33818.2 |
| rod shape-determining protein roda | PH7735_03032 | P44468 | Negative | 3170336 - 3171475 | 41332.8 |
| sporulation-specific penicillin-binding protein | PH7735_03033 | E1WGF1 | Negative | 3171472 - 3173418 | 71295.4 |
| hypothetical protein | PH7735_03034 | Not Available | Negative | 3173415 - 3173954 | 19453.6 |
| rod shape-determining protein mrec | PH7735_03035 | Q70AN6 | Negative | 3173947 - 3174879 | 33818.6 |
| rod shape-determining protein mreb | PH7735_03036 | A0A0H3C7V4 | Negative | 3174934 - 3175974 | 36594.5 |
| arylsulfatase precursor | PH7735_03037 | P25549 | Negative | 3176238 - 3177779 | 58008.2 |
| 2-isopropylmalate synthase | PH7735_03038 | B0T0G9 | Negative | 3178022 - 3179596 | 57187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
