Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transmembrane protein (alph_pro_tm) | PH7735_02989 | Not Available | Negative | 3127229 - 3127996 | 27738.6 |
| sulfite exporter taue/safe | PH7735_02990 | O32134 | Negative | 3127998 - 3128915 | 32229.4 |
| l-arabinose transporter permease protein | PH7735_02991 | O05255 | Negative | 3129158 - 3130123 | 33958.4 |
| ribose abc transporter permease protein | PH7735_02992 | O05254 | Negative | 3130123 - 3131217 | 39053.9 |
| ribose import atp-binding protein rbsa | PH7735_02993 | Not Available | Negative | 3131210 - 3132811 | 58472.6 |
| hypothetical protein | PH7735_02994 | Not Available | Negative | 3132808 - 3133164 | 12878.1 |
| purine nucleoside receptor a | PH7735_02995 | O05252 | Negative | 3133252 - 3134241 | 34786.4 |
| ribosomal-protein-alanine n-acetyltransferase | PH7735_02996 | Not Available | Negative | 3134420 - 3134833 | 14806.6 |
| t(6)a37 threonylcarbamoyladenosine biosynthesis protein | PH7735_02997 | Not Available | Negative | 3134830 - 3135477 | 22491.9 |
| hypothetical protein | PH7735_02998 | Not Available | Negative | 3135489 - 3135671 | 6729.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
