Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 277537 - 277611 | Not Available |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PH7735_00260 | Q5LL90 | Positive | 277868 - 279133 | 44545.2 |
| hypothetical protein | PH7735_00261 | Not Available | Positive | 279133 - 279612 | 17284.5 |
| putative integral membrane protein | PH7735_00262 | Not Available | Positive | 279736 - 280245 | 18424.9 |
| histidinol dehydrogenase | PH7735_00263 | Q5LL27 | Positive | 280299 - 281600 | 45916.3 |
| hypothetical protein | PH7735_00264 | Q1GLD5 | Positive | 281675 - 282154 | 18324.9 |
| arsenate reductase | PH7735_00265 | Not Available | Positive | 282174 - 282614 | 16632.7 |
| ketosteroid isomerase-related protein | PH7735_00266 | Not Available | Positive | 282712 - 283107 | 14470.9 |
| hypothetical protein | PH7735_00267 | Not Available | Positive | 283104 - 283397 | 10763.5 |
| hypothetical protein | PH7735_00268 | Not Available | Positive | 283596 - 283688 | 3474.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
