Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein | PH7735_02959 | Not Available | Negative | 3099329 - 3100012 | 25948.1 |
| hypothetical protein | PH7735_02960 | Not Available | Negative | 3100247 - 3100795 | 19590.3 |
| hypothetical protein | PH7735_02961 | Not Available | Positive | 3100874 - 3101452 | 21516.7 |
| malate dehydrogenase | PH7735_02962 | A8LJK6 | Negative | 3101621 - 3102583 | 33451.7 |
| hypothetical protein | PH7735_02963 | Not Available | Positive | 3102790 - 3102999 | 7158.57 |
| sulfite exporter taue/safe | PH7735_02964 | Not Available | Positive | 3103046 - 3103786 | 26467.0 |
| hypothetical protein | PH7735_02965 | Not Available | Negative | 3103788 - 3104099 | 10838.0 |
| (3s)-malyl-coa thioesterase | PH7735_02966 | A3PN16 | Positive | 3104283 - 3105137 | 30329.6 |
| putative membrane protein | PH7735_02967 | Not Available | Positive | 3105175 - 3105723 | 19889.2 |
| hypothetical protein | PH7735_02968 | Not Available | Positive | 3105728 - 3105931 | 7536.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
