Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octaprenyl-diphosphate synthase | PH7735_02919 | P0AD57 | Negative | 3064164 - 3065165 | 36069.9 |
| hypothetical protein | PH7735_02920 | Not Available | Positive | 3065191 - 3065436 | 8792.84 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | PH7735_02921 | Not Available | Positive | 3065443 - 3066192 | 26974.2 |
| hypothetical protein | PH7735_02922 | Not Available | Positive | 3066384 - 3066554 | 6426.62 |
| aromatic amino acid exporter yddg | PH7735_02923 | D7A5Q8 | Negative | 3066551 - 3067414 | 29738.0 |
| gcv operon activator | PH7735_02924 | Not Available | Negative | 3067411 - 3068361 | 35168.0 |
| hypothetical protein | PH7735_02925 | Not Available | Positive | 3068472 - 3068630 | 5869.94 |
| hypothetical protein | PH7735_02926 | Not Available | Negative | 3068785 - 3069903 | 39818.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PH7735_02927 | P50204 | Negative | 3070135 - 3070860 | 25490.4 |
| acetyl-coa acetyltransferase | PH7735_02928 | P54810 | Negative | 3071054 - 3072229 | 40491.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
