Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor guanylyltransferase | PH7735_02909 | A4Z027 | Positive | 3052060 - 3052683 | 21902.3 |
| molybdenum cofactor biosynthesis adapter protein | PH7735_02910 | P44902 | Positive | 3052683 - 3053174 | 18175.5 |
| molybdopterin molybdenumtransferase | PH7735_02911 | P45210 | Positive | 3053171 - 3054430 | 44281.0 |
| hypothetical protein | PH7735_02912 | Not Available | Negative | 3054506 - 3055531 | 37195.6 |
| transcript cleavage factor grea | PH7735_02913 | Q5LXA4 | Negative | 3055556 - 3056011 | 16480.6 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | PH7735_02914 | Q9HZP5 | Positive | 3056284 - 3057936 | 60146.1 |
| hemolysin ia | PH7735_02915 | Not Available | Positive | 3058085 - 3059605 | 53529.8 |
| hemolysin, plasmid | PH7735_02916 | Not Available | Positive | 3059917 - 3061434 | 52660.9 |
| lipoprotein nlpi | PH7735_02917 | Not Available | Positive | 3061583 - 3063292 | 62491.0 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | PH7735_02918 | Q5LX98 | Positive | 3063282 - 3064118 | 29169.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
