Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase precursor | PH7735_00249 | Not Available | Positive | 267030 - 268616 | 59708.1 |
| haloacid dehalogenase-like hydrolase | PH7735_00250 | Not Available | Positive | 268712 - 269707 | 36506.8 |
| magnesium chelatase subunit i | PH7735_00251 | P94474 | Positive | 269720 - 270703 | 36069.4 |
| hypothetical protein | PH7735_00252 | P9WLX4 | Positive | 270712 - 271659 | 35192.2 |
| hypothetical protein | PH7735_00253 | Not Available | Positive | 271656 - 272138 | 17661.2 |
| vwfa-related acidobacterial domain protein | PH7735_00254 | Not Available | Positive | 272135 - 273118 | 35635.2 |
| tetratricopeptide repeat | PH7735_00255 | Not Available | Positive | 273118 - 274644 | 56028.6 |
| hypothetical protein | PH7735_00256 | Not Available | Positive | 274641 - 275903 | 45818.9 |
| s-adenosyl-l-methionine-binding protein | PH7735_00257 | Q6NDF6 | Positive | 275922 - 276404 | 18020.6 |
| guanidinobutyrase | PH7735_00258 | Q9I6K2 | Negative | 276411 - 277376 | 34496.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
