Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | PH7735_02869 | Q9LUW5 | Negative | 3016560 - 3018452 | 68263.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | PH7735_02870 | Q3IYX7 | Positive | 3018627 - 3019292 | 24939.0 |
| sulfur carrier protein moad | PH7735_02871 | Not Available | Positive | 3019297 - 3019548 | 9332.17 |
| molybdopterin synthase catalytic subunit | PH7735_02872 | Q53091 | Positive | 3019554 - 3019997 | 16359.5 |
| beta-lactamase oxa-10 precursor | PH7735_02873 | Q00982 | Negative | 3020040 - 3020846 | 30494.2 |
| membrane-bound metallopeptidase | PH7735_02874 | Not Available | Negative | 3020907 - 3021221 | 12040.2 |
| inner membrane lipoprotein yiad precursor | PH7735_02875 | Not Available | Negative | 3021208 - 3023166 | 69383.8 |
| 4-hydroxybenzoate octaprenyltransferase | PH7735_02876 | Q499N4 | Negative | 3023345 - 3024310 | 35546.5 |
| ribosomal rna small subunit methyltransferase e | PH7735_02877 | Q92J59 | Positive | 3024323 - 3025048 | 26597.0 |
| putative acetyltransferase | PH7735_02878 | Not Available | Positive | 3025045 - 3025887 | 29763.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
