Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02859 | Not Available | Positive | 3007855 - 3008013 | 5558.72 |
| hypothetical protein | PH7735_02860 | Not Available | Positive | 3008010 - 3008168 | 5365.43 |
| putative enoyl-coa hydratase echa8 | PH7735_02861 | Not Available | Positive | 3008273 - 3009133 | 31450.1 |
| hypothetical protein | PH7735_02862 | Not Available | Positive | 3009165 - 3009689 | 18205.4 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | PH7735_02863 | P36879 | Positive | 3009854 - 3010783 | 33684.7 |
| inner membrane transport permease yadh | PH7735_02864 | P0AFN8 | Positive | 3010780 - 3011541 | 27984.9 |
| putative protease sohb | PH7735_02865 | Q8YFI5 | Positive | 3011668 - 3012429 | 27484.3 |
| inner membrane protein yrbg | PH7735_02866 | Q0ZAI3 | Positive | 3012598 - 3013545 | 33507.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PH7735_02867 | Q49117 | Positive | 3013558 - 3014334 | 27618.8 |
| excinuclease abc subunit c | PH7735_02868 | Q5LMC7 | Positive | 3014630 - 3016504 | 69334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
