Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase | PH7735_02849 | O34292 | Positive | 2999841 - 3000809 | 34489.8 |
| sulfur carrier protein this | PH7735_02850 | Not Available | Positive | 3000778 - 3000975 | 6995.4 |
| thiazole synthase | PH7735_02851 | Q5LWJ1 | Positive | 3000977 - 3001744 | 26787.4 |
| thiamine-phosphate synthase | PH7735_02852 | O34294 | Positive | 3001744 - 3002337 | 21627.0 |
| putative adenylyltransferase/sulfurtransferase moez | PH7735_02853 | A1CAZ7 | Positive | 3002334 - 3003302 | 33566.6 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | PH7735_02854 | P56904 | Positive | 3003299 - 3004003 | 23745.8 |
| hypothetical protein | PH7735_02855 | Not Available | Positive | 3003958 - 3004215 | 9233.38 |
| quinolinate synthase a | PH7735_02856 | Q92R33 | Positive | 3004178 - 3005227 | 38495.1 |
| l-aspartate oxidase | PH7735_02857 | Q92R32 | Positive | 3005233 - 3006798 | 54195.7 |
| putative nicotinate-nucleotide pyrophosphorylase | PH7735_02858 | P77938 | Positive | 3006795 - 3007643 | 29826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
