Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mercuric reductase | PH7735_02839 | P00392 | Positive | 2989980 - 2991398 | 50190.6 |
| sensor protein zras | PH7735_02840 | Not Available | Positive | 2991419 - 2992807 | 50719.9 |
| Trna-arg | Not Available | Not Available | Positive | 2992868 - 2992944 | Not Available |
| yhs domain protein | PH7735_02842 | Not Available | Negative | 2993245 - 2993700 | 16532.5 |
| putative bifunctional cbb3-type cytochrome c oxidase subunit ii/cytochrome c | PH7735_02843 | Not Available | Negative | 2993802 - 2994248 | 16381.0 |
| multicopper oxidase mco | PH7735_02844 | Q12570 | Negative | 2994230 - 2995525 | 47103.1 |
| putative copper export protein | PH7735_02845 | Not Available | Negative | 2995534 - 2996400 | 30240.3 |
| copper resistance protein c precursor | PH7735_02846 | Not Available | Negative | 2996403 - 2996744 | 12254.7 |
| cytochrome c oxidase, cbb3-type, subunit iii | PH7735_02847 | Not Available | Negative | 2996756 - 2997187 | 15238.1 |
| phosphomethylpyrimidine synthase | PH7735_02848 | Q1GEY0 | Positive | 2998045 - 2999844 | 66683.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
