Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gtp-binding protein engb | PH7735_02829 | Q1GJX8 | Negative | 2981523 - 2982176 | 23878.9 |
| putative fe-s protein | PH7735_02830 | Not Available | Negative | 2982176 - 2982922 | 27177.1 |
| oxa1ec | PH7735_02831 | Q5LW11 | Negative | 2982922 - 2984724 | 66433.9 |
| bacteriophytochrome cph2 | PH7735_02832 | P9WM12 | Negative | 2984882 - 2986420 | 56442.3 |
| trna 2-thiocytidine biosynthesis protein ttca | PH7735_02833 | Q1GJX4 | Negative | 2986485 - 2987354 | 33181.3 |
| hypothetical protein | PH7735_02834 | Not Available | Negative | 2987523 - 2988029 | 18358.9 |
| putative membrane protein insertion efficiency factor | PH7735_02835 | Q5LW07 | Negative | 2988140 - 2988379 | 8825.7 |
| ribonuclease p | PH7735_02836 | Q5LW06 | Negative | 2988376 - 2988798 | 15398.8 |
| 50s ribosomal protein l34 | PH7735_02837 | Q1GJX0 | Negative | 2988824 - 2988958 | 5153.46 |
| snare associated golgi protein | PH7735_02838 | Not Available | Positive | 2989231 - 2989980 | 26490.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
