Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | PH7735_02809 | Q28UT2 | Positive | 2963887 - 2964465 | 20547.7 |
| hypothetical protein | PH7735_02810 | Q5LW34 | Positive | 2964828 - 2965196 | 13480.5 |
| hypothetical protein | PH7735_02811 | Q5LW33 | Positive | 2965212 - 2965604 | 13760.4 |
| dna-directed rna polymerase subunit alpha | PH7735_02812 | Q5LW32 | Positive | 2965717 - 2966733 | 37128.2 |
| 50s ribosomal protein l17 | PH7735_02813 | Q16AB7 | Positive | 2966870 - 2967292 | 15896.3 |
| periplasmic serine endoprotease degp precursor | PH7735_02814 | E1V4H2 | Positive | 2967451 - 2968833 | 48814.4 |
| replication-associated recombination protein a | PH7735_02815 | P39918 | Positive | 2968836 - 2970158 | 48460.0 |
| camphor resistance protein crcb | PH7735_02816 | Q1GJZ3 | Positive | 2970213 - 2970650 | 15004.9 |
| ribosomal large subunit pseudouridine synthase c | PH7735_02817 | Q8ZFU1 | Positive | 2970647 - 2971690 | 38089.9 |
| pyrophosphatase ppax | PH7735_02818 | Q87L12 | Positive | 2971687 - 2972361 | 24118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
