Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | PH7735_02799 | Q1GK15 | Positive | 2957791 - 2958180 | 14088.0 |
| hypothetical protein | PH7735_02800 | A8LM72 | Positive | 2958193 - 2958726 | 19250.2 |
| hypothetical protein | PH7735_02801 | Q5LW42 | Positive | 2958738 - 2959097 | 12895.7 |
| 30s ribosomal protein s5 | PH7735_02802 | Q5LW41 | Positive | 2959210 - 2959779 | 20579.9 |
| 50s ribosomal protein l30 | PH7735_02803 | Q5LW40 | Positive | 2959792 - 2959980 | 7043.8 |
| hypothetical protein | PH7735_02804 | Not Available | Positive | 2960438 - 2960641 | 7558.01 |
| hypothetical protein | PH7735_02805 | Not Available | Positive | 2960867 - 2961010 | 5219.22 |
| hypothetical protein | PH7735_02806 | Not Available | Negative | 2961065 - 2961700 | 24023.5 |
| 50s ribosomal protein l15 | PH7735_02807 | Q5LW38 | Positive | 2961946 - 2962407 | 16216.8 |
| preprotein translocase subunit secy | PH7735_02808 | Q1RHP1 | Positive | 2962526 - 2963890 | 48975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
