Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-binding protein | PH7735_02749 | Q16AM7 | Positive | 2913061 - 2913285 | 7162.83 |
| f-type atpase subunit b' | PH7735_02750 | Q16AM6 | Positive | 2913374 - 2913916 | 18555.9 |
| f-type atpase subunit b | PH7735_02751 | Q16AM5 | Positive | 2913922 - 2914479 | 19916.9 |
| hypothetical protein | PH7735_02752 | Not Available | Positive | 2914666 - 2914857 | 7059.82 |
| ribonuclease i precursor | PH7735_02753 | Q07465 | Negative | 2914874 - 2915512 | 23984.6 |
| hypothetical protein | PH7735_02754 | Not Available | Positive | 2915645 - 2916403 | 27629.3 |
| recombination protein recr | PH7735_02755 | Q5LMJ4 | Negative | 2916502 - 2917092 | 21171.5 |
| nucleoid-associated protein ybab | PH7735_02756 | Q5E465 | Negative | 2917180 - 2917524 | 12139.7 |
| dna polymerase iii subunit tau | PH7735_02757 | P74876 | Negative | 2917608 - 2919362 | 63087.5 |
| putative metalloprotease | PH7735_02758 | P64431 | Positive | 2919564 - 2920403 | 29962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
