Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator mcbr | PH7735_02659 | Not Available | Negative | 2830854 - 2831519 | 25154.4 |
| dimethylsulfonioproprionate demethylase dmda | PH7735_02660 | Q4FP21 | Negative | 2831542 - 2832645 | 40380.3 |
| toluene-4-sulfonate monooxygenase system iron-sulfur subunit tsam1 | PH7735_02661 | Q9AHG3 | Negative | 2832731 - 2833804 | 40325.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PH7735_02662 | A2SDV6 | Negative | 2833801 - 2834655 | 30743.9 |
| cryptochrome-like protein cry2 | PH7735_02663 | P25078 | Negative | 2835129 - 2836661 | 58752.4 |
| hypothetical protein | PH7735_02664 | Not Available | Negative | 2836672 - 2836896 | 8568.15 |
| deoxyribodipyrimidine photo-lyase | PH7735_02665 | Not Available | Negative | 2836880 - 2838133 | 46504.8 |
| deoxyribodipyrimidine photo-lyase-related protein | PH7735_02666 | A9CH39 | Negative | 2838284 - 2839816 | 58909.4 |
| hypothetical protein | PH7735_02667 | Not Available | Negative | 2839831 - 2840343 | 17787.1 |
| hypothetical protein | PH7735_02668 | Not Available | Negative | 2840631 - 2841281 | 23214.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
