Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-glutamate deacylase | PH7735_02629 | Not Available | Positive | 2797327 - 2799246 | 70565.0 |
| putative hydrolase yxep | PH7735_02630 | Q8H3C8 | Negative | 2799355 - 2800506 | 40675.3 |
| inner membrane protein | PH7735_02631 | O28169 | Negative | 2800665 - 2801303 | 22015.6 |
| pantothenate kinase | PH7735_02632 | Q9UTC5 | Negative | 2801409 - 2802074 | 23829.5 |
| hypothetical protein | PH7735_02633 | Not Available | Negative | 2802300 - 2803802 | 54749.5 |
| hypothetical protein | PH7735_02634 | Not Available | Negative | 2803830 - 2805356 | 56887.6 |
| m5 polypeptide | PH7735_02635 | Not Available | Positive | 2805543 - 2806550 | 36765.1 |
| acyl-coa dehydrogenase | PH7735_02636 | P45857 | Negative | 2806623 - 2807768 | 41291.1 |
| virulence-regulating protein virs | PH7735_02637 | Not Available | Positive | 2807855 - 2808898 | 39032.4 |
| hypothetical protein | PH7735_02638 | Not Available | Negative | 2809234 - 2809485 | 9065.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
