Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02619 | Not Available | Positive | 2786266 - 2787408 | 39735.7 |
| Trna-leu | Not Available | Not Available | Positive | 2787537 - 2787621 | Not Available |
| hypothetical protein | PH7735_02621 | Not Available | Positive | 2787864 - 2788400 | 19591.0 |
| hypothetical protein | PH7735_02622 | Not Available | Negative | 2788590 - 2789552 | 34184.0 |
| hypothetical protein | PH7735_02623 | Not Available | Negative | 2789620 - 2790159 | 19164.5 |
| glutathione s-transferase gst-6.0 | PH7735_02624 | Not Available | Negative | 2790600 - 2791223 | 22655.1 |
| hth domain protein | PH7735_02625 | Not Available | Positive | 2791321 - 2792031 | 26717.5 |
| virulence-regulating protein virs | PH7735_02626 | Q9I1P2 | Positive | 2792226 - 2793302 | 40064.1 |
| hypothetical protein | PH7735_02627 | Not Available | Positive | 2793407 - 2796085 | 94616.7 |
| virulence-regulating protein virs | PH7735_02628 | Not Available | Negative | 2796191 - 2797201 | 36361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
