Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02609 | Not Available | Positive | 2776059 - 2776328 | 9632.9 |
| hypothetical protein | PH7735_02610 | Not Available | Positive | 2776428 - 2776955 | 19545.9 |
| exosortase a system-associated hydrolase 2 | PH7735_02611 | Not Available | Negative | 2776962 - 2778176 | 43116.3 |
| putative peptidase | PH7735_02612 | A3SK19 | Negative | 2778384 - 2779727 | 51022.8 |
| hypothetical protein | PH7735_02613 | Not Available | Positive | 2779851 - 2780612 | 28706.2 |
| flavodoxin | PH7735_02614 | Not Available | Negative | 2780609 - 2781094 | 17530.2 |
| hypothetical protein | PH7735_02615 | Not Available | Negative | 2781194 - 2782303 | 41276.1 |
| glutamine synthetase 1 | PH7735_02616 | P43518 | Negative | 2782523 - 2783929 | 51907.1 |
| nitrogen regulatory protein p-ii | PH7735_02617 | P13556 | Negative | 2783965 - 2784303 | 12181.7 |
| nicotinamide nucleotide repair protein | PH7735_02618 | B5YIM0 | Positive | 2784477 - 2786075 | 55432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
