Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative secreted protein | PH7735_02599 | Not Available | Positive | 2768607 - 2769305 | 25314.3 |
| phosphatidylinositol mannoside acyltransferase | PH7735_02600 | Not Available | Negative | 2769314 - 2770243 | 34623.2 |
| carboxylate/amino acid/amine transporter | PH7735_02601 | Not Available | Negative | 2770256 - 2771113 | 30785.5 |
| flagellar motor switch protein g | PH7735_02602 | P23448 | Negative | 2771173 - 2772240 | 38335.1 |
| hypothetical protein | PH7735_02603 | Not Available | Negative | 2772322 - 2772864 | 19834.6 |
| hypothetical protein | PH7735_02604 | Not Available | Negative | 2773183 - 2773353 | 5780.21 |
| hypothetical protein | PH7735_02605 | Not Available | Negative | 2773366 - 2773533 | 6171.56 |
| adenylosuccinate lyase | PH7735_02606 | P12047 | Negative | 2773688 - 2774992 | 48421.3 |
| hypothetical protein | PH7735_02607 | Not Available | Positive | 2775071 - 2775427 | 13175.2 |
| hypothetical protein | PH7735_02608 | Not Available | Positive | 2775483 - 2776046 | 20285.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
