Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02549 | Not Available | Negative | 2711821 - 2712345 | 18753.7 |
| hypoxic response protein 1 | PH7735_02550 | Not Available | Negative | 2712412 - 2714238 | 66737.3 |
| acetate transporter actp | PH7735_02551 | P31640 | Negative | 2714347 - 2716134 | 63026.0 |
| putative solute:sodium symporter small subunit | PH7735_02552 | Not Available | Negative | 2716152 - 2716409 | 9472.6 |
| adenylate kinase | PH7735_02553 | Q2W2L1 | Negative | 2716488 - 2717171 | 23661.2 |
| acetyl-coenzyme a synthetase | PH7735_02554 | Not Available | Negative | 2717179 - 2719143 | 72178.1 |
| hypothetical protein | PH7735_02555 | Not Available | Positive | 2719375 - 2719497 | 4370.36 |
| cyclolysin | PH7735_02556 | Not Available | Negative | 2719588 - 2722413 | 97086.8 |
| hypothetical protein | PH7735_02557 | Not Available | Positive | 2722508 - 2723230 | 25615.3 |
| gamma-glutamylputrescine oxidoreductase | PH7735_02558 | P44732 | Positive | 2723290 - 2724564 | 45403.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
