Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter component | PH7735_02509 | Q9PFB2 | Negative | 2671995 - 2672432 | 14967.0 |
| beta-lactamase hydrolase-like protein | PH7735_02510 | Q3JRV4 | Negative | 2672523 - 2673386 | 31681.2 |
| regulatory protein, ytea family | PH7735_02511 | Not Available | Positive | 2673418 - 2673861 | 16015.2 |
| hypothetical protein | PH7735_02512 | Not Available | Positive | 2673888 - 2674103 | 8084.57 |
| fatty acid oxidation complex subunit alpha | PH7735_02513 | P55100 | Positive | 2674238 - 2676316 | 74647.3 |
| hypothetical protein | PH7735_02514 | Not Available | Negative | 2676328 - 2676543 | 7605.84 |
| hypothetical protein | PH7735_02515 | B1ZEG3 | Positive | 2676744 - 2677004 | 10131.1 |
| hypothetical protein | PH7735_02516 | Not Available | Negative | 2677155 - 2678036 | 33125.6 |
| molybdenum transport system permease protein modb | PH7735_02517 | Not Available | Positive | 2678121 - 2679791 | 59883.2 |
| putative hydrogen peroxide-inducible genes activator | PH7735_02518 | O32186 | Positive | 2679931 - 2680851 | 33326.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
