Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine/isoleucine/valine transporter permease subunit | PH7735_02499 | Not Available | Negative | 2661204 - 2662397 | 43425.6 |
| liv-i protein h | PH7735_02500 | P0A2J2 | Negative | 2662401 - 2663423 | 36681.0 |
| urea abc transporter, urea binding protein | PH7735_02501 | Not Available | Negative | 2663550 - 2664896 | 47275.6 |
| putative transcriptional regulator | PH7735_02502 | Q8NTD8 | Positive | 2665116 - 2666414 | 47569.8 |
| transcriptional regulatory protein walr | PH7735_02503 | A7WWQ5 | Positive | 2666509 - 2666877 | 13430.3 |
| hypothetical protein | PH7735_02504 | Not Available | Positive | 2666874 - 2667167 | 11287.7 |
| sensor protein kdpd | PH7735_02505 | Not Available | Positive | 2667168 - 2669864 | 97188.4 |
| flagellar motor switch protein flim | PH7735_02506 | Not Available | Positive | 2670024 - 2671052 | 36946.1 |
| beta-lactamase hydrolase-like protein | PH7735_02507 | Not Available | Negative | 2671122 - 2671550 | 15187.2 |
| putative transporter component | PH7735_02508 | Q9PFB3 | Negative | 2671561 - 2671995 | 15091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
