Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine efflux protein | PH7735_00209 | Q8Z3B3 | Positive | 225687 - 226313 | 22071.3 |
| holo-[acyl-carrier-protein] synthase | PH7735_00210 | Q16AI8 | Positive | 226310 - 226723 | 15310.3 |
| signal peptidase i | PH7735_00211 | Q8L2J7 | Positive | 226771 - 227607 | 30845.9 |
| ribonuclease 3 | PH7735_00212 | A3PGF8 | Positive | 227604 - 228284 | 24703.7 |
| phosphonate utilization associated putative membrane protein | PH7735_00213 | Q92JG1 | Positive | 228290 - 229171 | 30959.1 |
| bex protein | PH7735_00214 | A8LLE0 | Positive | 229213 - 230121 | 34023.1 |
| hypothetical protein | PH7735_00215 | Not Available | Positive | 230118 - 230450 | 12355.6 |
| recombination protein o | PH7735_00216 | Q5LNK7 | Positive | 230505 - 231236 | 26919.5 |
| meta domain protein | PH7735_00217 | Not Available | Negative | 231223 - 231615 | 14077.0 |
| hypothetical protein | PH7735_00218 | Not Available | Negative | 231619 - 232209 | 21442.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
