Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein cspa | PH7735_02449 | Not Available | Negative | 2618937 - 2619143 | 7378.66 |
| putative reductase | PH7735_02450 | P44515 | Positive | 2619351 - 2619662 | 11575.9 |
| hypothetical protein | PH7735_02451 | Not Available | Positive | 2619710 - 2620078 | 12856.0 |
| doxx | PH7735_02452 | Not Available | Negative | 2620081 - 2620596 | 18724.5 |
| hypothetical protein | PH7735_02453 | Not Available | Negative | 2620606 - 2621355 | 26891.8 |
| hypothetical protein | PH7735_02454 | B9JEP8 | Negative | 2621352 - 2622209 | 31643.0 |
| putative integral membrane protein | PH7735_02455 | Not Available | Negative | 2622240 - 2622542 | 10235.8 |
| putative integral membrane protein | PH7735_02456 | Not Available | Negative | 2622680 - 2622985 | 10227.0 |
| threonine--trna ligase | PH7735_02457 | Q5LTX8 | Negative | 2623219 - 2625168 | 73971.6 |
| acetoin dehydrogenase e2 subunit dihydrolipoyllysine-residue acetyltransferase | PH7735_02458 | Q5I0K5 | Positive | 2625325 - 2626074 | 27430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
