Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02429 | Not Available | Positive | 2602419 - 2602721 | 11287.5 |
| pp_02404 | PH7735_02430 | Not Available | Negative | 2602726 - 2603871 | Not Available |
| hypothetical protein | PH7735_02431 | Not Available | Positive | 2603995 - 2604273 | 10364.4 |
| cell cycle response regulator ctra | PH7735_02432 | A6WZ81 | Positive | 2604369 - 2605088 | 26946.5 |
| dna ligase | PH7735_02433 | Q5LST6 | Positive | 2605163 - 2607439 | 82227.2 |
| atp-dependent dna helicase recg | PH7735_02434 | Q9CMB4 | Positive | 2607436 - 2609526 | 76302.0 |
| hypothetical protein | PH7735_02435 | Not Available | Positive | 2609636 - 2609758 | 4267.49 |
| suf system fes assembly protein, nifu family | PH7735_02436 | Not Available | Negative | 2609987 - 2610436 | 15656.8 |
| phosphoribosyl-amp cyclohydrolase | PH7735_02437 | Q5LST2 | Positive | 2610504 - 2610863 | 13578.1 |
| hypothetical protein | PH7735_02438 | Not Available | Negative | 2610876 - 2611295 | 16239.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
