Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tellurite resistance protein tehb | PH7735_02359 | Not Available | Negative | 2523191 - 2523790 | 21842.8 |
| translation initiation factor if-3 | PH7735_02360 | Q5LQ58 | Negative | 2523881 - 2524285 | 15528.1 |
| hypothetical protein | PH7735_02361 | Not Available | Positive | 2524621 - 2525355 | 25032.5 |
| alkaline phosphatase synthesis sensor protein phor | PH7735_02362 | Q9KHI5 | Positive | 2525569 - 2527485 | 69447.4 |
| ferredoxin--nadp reductase | PH7735_02363 | Q9L6V3 | Negative | 2527544 - 2528401 | 31955.2 |
| hypothetical protein | PH7735_02364 | Not Available | Negative | 2528503 - 2528922 | 15220.7 |
| phosphoadenosine phosphosulfate reductase | PH7735_02365 | Q98GP9 | Negative | 2528919 - 2529680 | 28143.5 |
| sulfite reductase | PH7735_02366 | Q39161 | Negative | 2529670 - 2531337 | 61723.5 |
| hypothetical protein | PH7735_02367 | Not Available | Negative | 2531367 - 2531666 | 11086.8 |
| siroheme synthase | PH7735_02368 | Q606C9 | Negative | 2531666 - 2533054 | 49576.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
